Index

A

average_jacobian() (in module disptools.displacements)

average_jacobian_error() (in module disptools.measure) average_jacobian_from_displacements() (in module disptools.displacements)

C

centre_of_mass() (in module disptools.measure) compose_displacements() (in module disptools.displacements)

create_sphere() (in module disptools.drawing) create_target_volume() (in module disptools.predict) cubicity() (in module disptools.measure)

D

decompose_displacements() (in module disptools.displacements) deformation_to_displacement() (in module disptools.displacements) displacement() (in module disptools.displacements) disptools (module) disptools.displacements (module)

disptools.drawing (module) disptools.io (module) disptools.measure (module) disptools.predict (module) disptools.simulatrophy (module)

E

entropy() (in module disptools.measure)

extract_slice() (in module disptools.drawing)

F

f() (in module disptools.measure) field_zero_padding() (in module disptools.displacements)

fitting_index() (in module disptools.measure) float_dilate() (in module disptools.drawing)

I

inverse_consistency_error() (in module disptools.displacements)

invert_displacement_padded() (in module disptools.displacements) isovolumteric_radius() (in module disptools.measure)

J

jaccard() (in module disptools.measure) jacobian() (in module disptools.displacements)

jacobian_to_atrophy_map() (in module disptools.simulatrophy) jacobian_to_volume_change() (in module disptools.displacements)

M

make_unique_directory() (in module disptools.io) mask() (in module disptools.drawing)

mask_to_simulatrophy_mask() (in module disptools.simulatrophy) minkowski_compactness() (in module disptools.measure) mutual_information() (in module disptools.measure)

P

polar_conversion() (in module disptools.drawing)

R

read_deformation() (in module disptools.predict) read_elastix_parameters() (in module disptools.io) read_elastix_points() (in module disptools.io) read_img() (in module disptools.predict)

read_rvf() (in module disptools.io) redistribute_volume_change() (in module disptools.displacements) regularise() (in module disptools.displacements) reject_outliers() (in module disptools.measure) run() (in module disptools.simulatrophy)

S

scale_image() (in module disptools.drawing) sin_vector_field() (in module disptools.drawing)

sitk_to_itk() (in module disptools.drawing) sphericity() (in module disptools.measure)

V

volume_change() (in module disptools.measure)

volume_change_to_jacobian() (in module disptools.displacements)

W

warp_points_by_displacement() (in module disptools.displacements) write_elastix_parameters() (in module disptools.io)

write_elastix_points() (in module disptools.io) write_img() (in module disptools.predict) write_vtk_points() (in module disptools.io)